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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai |
| Regulated Operon: | yxeB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Genus clusters |
|---|---|---|---|---|---|---|
| yxeB | + | 4066198..4067157 | COG0614 | yxeB-BAC |
| Operon evidence: | Northern blotting (1.1 kb transcript); upstream and downstream genes are on the opposite strand |
|---|---|
| Reference: | Baichoo N, et al. (2002), Yoshida K, et al. (2000), BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| Fur | Negative | ND | 4066132..4066181 | CTATATTATTAATTGATAATGATAATCATTACTAATCTATTGAGATACAT |
Baichoo N, et al. (2002): FT Ollinger J, et al. (2006): DB SDS-PAGE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACGGCACAGTCATGACGCTGTGCCGTTTTTTATGATTCAC >>>>>>>>> <<<<<<<<< |
yxeB |
|