Regulated Operon: yxiD-yxxD-yxxE

Genes
Genes Synonyms Direction Genome position Function COG ID Genus clusters
yxiD
- 4035802..4037511

 
yxxD
- 4035362..4035805

 
yxxE
- 4035008..4035316

 

Operon evidence: Genome analysis
Reference: Le Coq D, et al. (1995), Yoshida K, et al. (2000)
Comments: yxiD and yxxD overlap. Northern blotting by Yoshida et al. showed one 1 kb transcript in the yxiD-yxxD region and one 700 bp transcript for yxxE. Both of these transcripts are too long to infer that these genes are transcribed monocistronically, but too short to cover a yxiD-yxxD-yxxE operon.


Promoters

No Data

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CATAACCTTGATTGGAAAAAATGCCTTTCAAGGTTTTTAATTACAATA
     >>>>>>>>>>        <<<<<<<<<<
4034970..4034997
11..38
-12.3
yxxE

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2006
Contact: Kenta Nakai