Phylogenetic profile : AbrB

Orthologous information of transcription factor. (Explanation of these marks.)
TF COG Orthologs
AbrB COG2002 +++....+.....++.+++..............++.+.......++....

Orthologous information of regulated genes. (Explanation of these marks.)
Regulated operon Regulated gene Orthologs
abrB abrB *+*....+.....++.+++..............++.+.......+*....
aprE aprE **+.+*..+..+++++....+.++..++++..+++.+.......+*+.+*
argCJBD-carAB-argF argC ++*+..++....++++***+++++.+++++..++++++......+*++.+
citB citB +.++..++....+++++++++.++..*+++...+++++++......+..+
comK comK *.....++..........................................
dppABCDE dppA +......+.....................+......+............+
ftsAZ ftsA *+++*+++........++++++++++++++++++++++++..++..++++
hpr hpr ****.***++++*+++*****+++**+**+...*+*+*........++*+
****+***....*+++*****.++..+**+...*+*+*.......+.+*+
hut hutP No ortholog data.
kinB-kapB kinB *******+....***+*****.+++*+**+++++++*+++++.+***+*+
pbpE-racX pbpE *++*+++*....+++++**++..+..*..+...+++*+++....*+...+
rbsRKDACB rbsR ******+*+...+++.+***+.++*++..+...+++++.........*++
rok rok No ortholog data.
sboAX-albABCDEFG sboA No ortholog data.
senS senS No ortholog data.
sigH sigH ++++..++....+++++++++.++++++++...+++++....+.++.+++
sigW-ybbM sigW **++..++....++++****+.+*+*+++*...+++*+....+.**.+++
sinIR sinI No ortholog data.
spo0E spo0E No ortholog data.
spoVG spoVG *+*...++...................................*....*.
skf ybcO No ortholog data.
ycnK ycnK *+******....+...*++*+.++*+.+++...+++*.........+**+
yknWXYZ yknW No ortholog data.
yoaW yoaW No ortholog data.
yocH yocH ****..+*....+++....+..++++..............++.+..+..+
****...*.......................................+.+
yrhIJ yrhI ++++++++...++++++++++.++++++++..++++++......++++++
sdp yvaW No ortholog data.
sdpRI yvbA +++++.++....+++++++++.++.+++++..++++++......++++++
yvlABCD yvlA No ortholog data.
yvqH yvqH ++*....+....+++.+++++.++............++......++*..+
yxbBA-yxnB-asnH-yxaM yxbB *******+....+++*****+++**++++++***++++**+++.*****+
yxbCD yxbC *...............++++*..+++++++....................
yxzE yxzE No ortholog data.




Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2005
Contact: Kenta Nakai