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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | codV-clpQY-codY |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| codV | + | 1687187..1688101 | COG4974L | codV-BAC | ||
| clpQ | codW | + | 1688114..1688659 | COG5405O | hslV-BAC | |
| clpY | codX | + | 1688676..1690079 | COG1220O | clpY-BAC clpY-STA | |
| codY | + | 1690119..1690898 | COG4465K | codY-BAC codY-STA x0200-STR |
| Operon evidence: | plasmid integrations and in-frame deletion mutations |
|---|---|
| Reference: | Slack FJ, et al. (1995) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -43:+6 | 1687120..1687168 | GTATTGATTGCAACCTGAGCGCGATTTGTGATACCATTTAAAAGCCCTT |
Slack FJ, et al. (1995): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGAACCCTTTTTGAGGGTTCTTTTTTTATTTCAAA >>>>>>>> <<<<<<<< |
codY |
|