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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | cysHP-sat-cysC-ylnDEF |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| cysH | + | 1630382..1631083 | COG0175EH | cysH-BAC | ||
| cysP | ylnA | + | 1631095..1632159 | COG0306P | ||
| sat | ylnB | + | 1632208..1633356 | COG2046P | sat-BAC | |
| cysC | ylnC | + | 1633369..1633962 | COG0529P | cysC-BAC cysC-STA | |
| ylnD | + | 1633361..1634134 | cysG-BAC | |||
| ylnE | + | 1634137..1634922 | ||||
| ylnF | + | 1634903..1635391 |
| Operon evidence: | Northern blotting (6.1 kb transcript) |
|---|---|
| Reference: | Mansilla MC, et al. (2000), Genbank AJ000974 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -39:+16 | 1630064..1630118 | AGTCGGGTTGACTTATGTTAGAATTGTGCTAAAATTTACTACAAATCTAAAAACT |
Mansilla MC, et al. (2000): NB DP |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AATAAGCCAGAGCATACAAATGCTCTGGCTTTTCTTTATGCGGC >>>>>>>>>> <<<<<<<<<< |
ylnF |
|