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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | glgBCDAP |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| glgB | - | 3169763..3171646 | COG0296G | |||
| glgC | - | 3168624..3169766 | COG0448G | |||
| glgD | - | 3167569..3168600 | COG0448G | |||
| glgA | - | 3166118..3167572 | COG0297G | |||
| glgP | - | 3163735..3166131 | COG0058G |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Kiel JA, et al. (1994) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | -39:+4 | 3171655..3171697 | CTTCGAATAAATACTATAAATGAAAACTATGATGTCAGAAAGG |
Hay RE, et al. (1986): S1, dinucleotide priming Kiel JA, et al. (1994): RG |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCCGCTGTATAAGCGGCTTTTTTTGTTCACAG >>>>>> <<<<<< |
glgP |
|