Regulated Operon: glnQHMP

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
glnQ
+ 2802358..2803086
COG1126E glnQ-BAC-1 glnQ-LAB glnQ-STR  
glnH
+ 2803108..2803929
COG0834ET glnH-BAC  
glnM
+ 2803990..2804640
COG0765E glnM-BAC  
glnP
+ 2804657..2805313
COG0765E glnM-BAC glnP-LAB glnP-STR-1 glnP-STR-2  

Operon evidence: Northern blotting (3.0 kb transcript)
Reference: Yoshida K, et al. (2003), Genbank Z69371
Comments: The readthrough terminator downstream of glnH leads to a 1.8 kb transcript.

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
TnrA Positive ND 2801879..2801895 GGGTATATTTTCTGACA Yoshida K, et al. (2003): AR HM GS

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
GAAAAGGATACTCTTTGGAGAGTATCCTTTTTGCATTAAAAC
     >>>>>>>>>    <<<<<<<<<
2805318..2805339
5..26
-13.4
 glnP
ATCCCGGGATGAGCAGGCGATGCTCATCCCAATTTGATAAGGAGTGA
     >>>>>>>>>>     <<<<<<<<<<
2803940..2803964
11..35
-22.7
 glnH

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai