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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | gspA |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| gspA | ywaG | - | 3944560..3945420 | COG1442M |
| Operon evidence: | Northern blotting (0.95 kb transcript) |
|---|---|
| Reference: | Glaser P, et al. (1990), Antelmann H, et al. (1995), Horsburgh MJ, et al. (2001) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigB | Promoter | -37:+2 | 3945444..3945482 | ACGTGTTTATTTTTTTGAAAAAGGGTATGTAACTTGTAC |
Antelmann H, et al. (1995): PE HB DB NB Petersohn A, et al. (1999): HB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACGCTTTTGAGATGATCAAAAGCGTTTTTTGTTTGTCTC >>>>>>>>> <<<<<<<<< |
gspA |
|