Regulated Operon: gyrA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
gyrA nalA + 6994..9459
COG0188L gyrA-BAC gyrA-MYC gyrA-STA gyrA-STR  

Operon evidence: S1 nuclease experiments; Northern blotting
Reference: Moriya S, et al. (1985), BSORF
Comments: BSORF shows various transcripts in the gyrA region, all terminating at the same position downstream of gyrA.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -45:+19 6871..6934 AGCAATTTAATGTGTATAATCATAAGTTTATTGATATAATGGAGAATAGTGAAATCGTATTGAA Ogasawara N, et al. (1985): S1

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGCGCAGCTGAAATAGCTGCGCTTTTTTGTGTCATAA
     >>>>>>>>>   <<<<<<<<<
9466..9486
7..27
-16.9
gyrA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai