Regulated Operon: katA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
katA kat-19 - 959535..960986
COG0753P katA-STA katX-BAC  

Operon evidence: Northern blotting (1.3 kb transcript)
Reference: Nguyen TT, et al. (2009)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PerR Negative ND 961012..961069 CTATTTTATAATAATTATAAAATAATATTGACTTTTTACTTAGAGATGATATTATGTT Herbig AF, et al. (2001): FT
Engelmann S, et al. (1995): NB
Bol DK & Yasbin RE (1994): RG HB PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAACCCGTTGTAGTCAGCGGGTTTTTTTATATTTAG
     >>>>>>>    <<<<<<<
959501..959518
17..34
-10.6
katA

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai