 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | pbpD-yuxK |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| pbpD | + | 3233911..3235785 | COG0744M | |||
| yuxK | yugD | + | 3235806..3236219 | COG3011S |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Popham DL & Setlow P (1994), Genbank Z93933 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigA | Promoter | -47:+18 | 3233844..3233908 | CTAAATTTAACCTTCTCGTAATCTCAAAAGAATGGTACGATATGGCTAGAATTTAGGAGAAAAGA |
Popham DL, et al. (1994): PE |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAAAATCCTAAAACGGCTTCGTTTTAGGATTTTGTCATCTATTC >>>>>>>>>> <<<<<<<<<< |
yuxK |
|