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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | purR-yabJ |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| purR | yabI | + | 54441..55298 | COG0503F | purR-BAC purR-STA | |
| yabJ | + | 55295..55672 | COG0251J | x0018-BAC |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Weng M, et al. (1995) |
| Comments: | Northern blotting results listed in BSORF show a yabH-purR-yabJ, a purR-yabJ, and a yabJ transcript. |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| PurR | Negative | ND | 54380..54432 | GATTAAATCCGTATGTTAAGTTATATTGATCTTAAAATATTCGGATTTTGGGG |
Weng M, et al. (1995): GS RG DB Shin BS, et al. (1997): GS FT Saxild HH, et al. (2001): HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| GAAAAGTGATTCTGGGAGAGCCGGGATCACTTTTTTATTTACCTT >>>>>>>>>> <<<<<<<<<< |
yabJ |
|