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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | spo0M |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| spo0M | ygaI | - | 953373..954149 | COG4326R |
| Operon evidence: | upstream and downstream genes are transcribed in the opposite direction |
|---|---|
| Reference: | Han WD, et al. (1998) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigH | Promoter | ND | 954199..954240 | AATAATAGGAAAAAAGTATGAATCAAACGAATCTTTTTTCCT |
Han WD, et al. (1998): DB, in vitro experiments |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGGAGCCGAGGCTCCTTTTCTTTAATAAAA >>>>> <<<<< |
spo0M |
|