Regulated Operon: ydaTS

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ydaT
- 492989..493441
COG4876S  
ydaS
- 492654..492911

x0110-BAC-1 x0110-BAC-2  

Operon evidence: Genome analysis
Reference: Petersohn A, et al. (1999)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigB Promoter ND 493461..493501 ATGCGTTTTTATTTTTCACCTGCGGGTACCATTTTTATAAA Petersohn A, et al. (1999): HB
SigB Promoter ND 492933..492974 AAGTGTTTCGAAATGATCAGGAGCGGTTATTGATTGGTAAAT Petersohn A, et al. (1999): HB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CAGGAGGCATCGTTTCGAAATGAAACGATGTCTTTTTATATGGGACC
     >>>>>>>>>>>     <<<<<<<<<<<
492610..492636
18..44
-17.7
ydaS

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai