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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yfmTS |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yfmT | + | 807091..808548 | COG1012C | |||
| yfmS | + | 808562..809422 | COG0840NT | yfmS-BAC |
| Operon evidence: | Northern blotting (2.4 kb transcript) |
|---|---|
| Reference: | Serizawa M, et al. (2004), Yamamoto H, et al. (1997), BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigD | Promoter | ND | 807027..807081 | TGAACCGATAGAAAAAATAGATTCGCCCATATTTTGATTTGCGGTTATAAAGGAG |
Serizawa M, et al. (2004): AR NB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TAAGAGACCGGGGACAAACATCCCCGGTCTTTTTCTTATCCTGC >>>>>>>>> <<<<<<<<< |
yfmS |
|