Regulated Operon: yjfB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yjfB
- 1283169..1283336

 

Operon evidence: Northern blotting (0.2 kb transcript)
Reference: Serizawa M, et al. (2004), Rivolta C, et al. (1998)
Comments: A 0.8 kb readthrough transcript was also detected.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigD Promoter ND 1283342..1283391 TTTCACTGTAAAATCATACAAACCCGCCGATAGGTAAGGCATAGGAGGTG Serizawa M, et al. (2004): AR NB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CCAGAGGCGGCCAAGAACTCCATCCTCCCGGCCGCCTTTATTGTTCACAAA
     >>>>>>>>>>>         <<<<<<<<<<<
1283126..1283156
13..43
-16.8
yjfB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai