Regulated Operon: yoaH

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yoaH
- 2029429..2031114
COG0840NT  

Operon evidence: Northern blotting (1.6 kb transcript)
Reference: Serizawa M, et al. (2004), Genbank AF027868
Comments: Serizawa mentions that the terminator is downstream of yoaH; in the Genbank sequence, the terminator overlaps the gene.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigD Promoter ND 2031192..2031238 TATCACTATAAAACTTGATAACACGTGTCGATATTATGGACATGAGC Serizawa M, et al. (2004): AR NB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CTTACGTGCAACCCCCATCTTATTCGGTGGGGGTTGGCTACTTTTACTGTGGTTGT
     >>>>>>>>>>>>>>      <<<<<<<<<<<<<
2029383..2029415
14..46
-22.6
yoaH

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai