Regulated Operon: yocK

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yocK
- 2097126..2097617
COG1734T  

Operon evidence: Northern blotting (0.5 kb transcript)
Reference: Petersohn A, et al. (1999), Genbank AF027868
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigB Promoter ND 2097629..2097678 CGATGTTTCCATGTTTGACAGAAGGCAAAACGGGAAACAGGATAGAAAGG Petersohn A, et al. (1999): NB 2D-gel HB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
GCCAAGCAAGTACACCGATATTAGATGTACTTGCTTTTTTTGAAAAAAA
     >>>>>>>>>           <<<<<<<<<
2097088..2097116
10..38
-13.2
yocK

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai