Regulated Operon: yqfSU

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yqfS nfo - 2593281..2594174
COG0648L  
yqfU
- 2592003..2592884
COG1284S x0569-BAC yqfU-BAC  

Operon evidence: Northern blotting (2.3 kb transcript)
Reference: Urtiz-Estrada N, et al. (2003)
Comments: The gene yqfT is located between yqfS and yqfU, but is transcribed in the opposite direction.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -40:+5 2594225..2594269 AGCCTGGGTATAAAAAGAAAATGAGCTATGAGATGGAGAAAATCA Urtiz-Estrada N, et al. (2003): PE NB RT-PCR

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
GAAAATGGCTTGCTGGACAGACAGCTGCCATTTTCTTTTTCATAC
     >>>>>>>>>>      <<<<<<<<<
2591922..2591946
57..81
-15.7
yqfU

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai