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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yraGF-adhB-yraED |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yraG | + | 2752802..2753047 | ||||
| yraF | + | 2753065..2753433 | COG5577M | |||
| adhB | + | 2753452..2754588 | COG1063ER | adhB-BAC-1 adhB-BAC-2 | ||
| yraE | + | 2754607..2754804 | ||||
| yraD | + | 2754820..2755119 | COG5577M |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Wang S, et al. (2006) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigG | Promoter | -39:+25 | 2752741..2752804 | TTCTGTATGCTTCAACTTCATTTCGGGAAATGTAACGTTGATAAAAGGAGGTTACATCAATATG |
Wang S, et al. (2006): AR, Race-PCR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CAGCCGCTGTCGTTCGTCAGCCAGGATATTTTTTCGAGCTTCT >>>>>> <<<<<<<< |
yraD |
|