Regulated Operon: ytiP

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ytiP pbuO + 3067957..3069255

 

Operon evidence: upstream and downstream genes are on the opposite strand
Reference: Lapidus A, et al. (1997), Genbank AF008220
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
PurR Negative ND 3068849..3068902 CAAATAAAACGAATAATATTAATGGTGTTTTGTTAAAACGTTCGTAATTGGAGG Saxild HH, et al. (2001): HM DB RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAACCCAAACGTCGCCGTTTGGGTTTTTTATGTAAACA
     >>>>>>>>    <<<<<<<<
3070222..3070241
967..986
-12.4
ytiP

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai