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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yvrPON |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yvrP | - | 3414023..3415216 | COG0845M | |||
| yvrO | - | 3413350..3414039 | COG1136V | |||
| yvrN | yvrM | - | 3412128..3413357 | COG0577V |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| ComK | Positive | ND | 3415410..3415429 | ATATGACTTGATTAAAAATG |
Ogura M, et al. (2002): AR RG HM DB |
| ComK | Positive | ND | 3415373..3415393 | TGTATGAAAAAATCCCGGTTT |
Ogura M, et al. (2002): AR RG HM DB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CGCTATGAATAAAAAGAACGCATCCAATTGGAATGCGTTCTTTTTTTAGCTGGGA >>>>>>>>>> <<<<<<<<<<< |
yvrN |
|