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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | yvyC-fliDST |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yvyC | yviH | - | 3634425..3634754 | COG1334N | ||
| fliD | - | 3632911..3634407 | COG1345N | |||
| fliS | - | 3632488..3632889 | COG1516NUO | x0147-BAC | ||
| fliT | - | 3632150..3632491 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Chen L & Helmann JD (1994) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigD | Promoter | -41:+4 | 3634775..3634819 | ATATGTGTAATCTTATCTCGACTTAGTCGATATAAACGATAGATT |
Chen L & Helmann JD (1994): RG DB Singer V (1987): Ph.D. thesis. University of California, Berkeley: PE? |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AACAGAAGGGGATCGGATCTACCAAGATCTGATCCAAGCCTTTTTTTATTTGGATTC >>>>>>>>>>>>>>> <<<<<<<<<<<<<<<<<< |
fliT |
|