Regulated Operon: ywaC

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ywaC ipa-7d - 3949952..3950584
COG2357S  

Operon evidence: downstream genes are on the opposite strand
Reference: Cao M, et al. (2002), Presecan E, et al. (1997)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigW Promoter -39:+3 3950621..3950662 ATTCATAGAACCTTGCAGCAGACAGGGACGTCTAGTACATGG Cao M, et al. (2002): ROMA AR RG PE RO

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGACGGCACCCAAGTGCCGTCTTTTTTTATTTGATA
     >>>>>>>>    <<<<<<<<
3949928..3949947
5..24
-15.7
ywaC

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai