Regulated Operon: ywbI-thiME

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ywbI ipa-24d - 3932198..3933103
COG0583K  
thiM ywbJ - 3931372..3932190
COG2145H  
thiE ywbK - 3930707..3931375
COG0352H  

Operon evidence: Northern blotting (2.4 kb transcript)
Reference: Zhang Y, et al. (1997)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -40:+9 3933142..3933190 TACTTATTGTACATAAGGTCTCTCTATAGGTAAAATATATATTAAGAAT Zhang Y, et al. (1997): PE NB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
AAAGGGCTGTTCTGTAAAAGGACAGCTTTTTTGCTGTCCAT
     >>>>>>>>     <<<<<<<<
3930665..3930685
22..42
-12.8
 thiE

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai