Regulated Operon: yxkJ

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yxkJ
+ 3978772..3980124

 

Operon evidence: Northern blotting (1.5 kb transcript)
Reference: Yoshida K, et al. (2000), BSORF
Comments: A shorter (0.7 kb) transcript was also measured. Its significance is unclear.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
CcpA Negative ND 3979777..3979799 CAATTGCAAACGGATACAATTCA Miwa Y, et al. (2000): RG

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CGCAAGCAAGTTCTTCGTCAAACGAAAGAGCTTGCTTTTTTGCATGTCCA
     >>>>>>>>>>>>>   <<<<<<<<<<<<<<
3981115..3981144
991..1020
-17.7
yxkJ

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai