Regulated Operon: yxkO

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
yxkO
- 3972448..3973278
COG0063G  

Operon evidence: Northern blotting (1.0 kb transcript); downstream gene is on the opposite strand
Reference: Yoshida K, et al. (2000)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigB Promoter ND 3973298..3973339 TTTTGTTTGAAAAAGAAAAGGGACAGGAAAAATAGGAAAAGA Petersohn A, et al. (1999): HB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGCTGTCTTCAGAGAGAAGACAGCTTTTCTTGATACCCC
     >>>>>>>>>     <<<<<<<<<
3972418..3972440
8..30
-16.6
yxkO

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai