Transcription factor: TrnD-Tyr

Factor type transfer RNA
SubtiList BG00056
Consensus seq. aANNaGGGTGGtACCgCG
Comment Uncharged tRNA-Tyr binds to the T-box sequence motif, promoting antitermination and transcriptional readthrough.
Link to Phylogenetic profile

Operon Regulated Gene Sigma Regulation Absolute position Location Binding seq.(cis-element) Experimental evidence
tyrS tyrS SigA Positive 3037941..3037957 None AGTAGGGTGGTACCGCG Henkin TM, et al. (1992): DP RG
Grundy FJ & Henkin TM (1993): RG SDM
Grundy FJ, et al. (1994): SDM RG
Grundy FJ, et al. (1997): SDM RG
Rollins SM, et al. (1997): SDM RG
Grundy FJ, et al. (2000): RG SDM NB
Gerdeman MS, et al. (2002): GS
Grundy FJ, et al. (2002): SDM RG
tyrZ tyrZ None Positive 3947078..3947094 None ACCAGGGTGGTACCGCG Henkin TM, et al. (1992): HM

Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai