Regulated Operon: | abnA |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
abnA | - | 2949053..2950024 | COG3507G |
Operon evidence: | Northern blotting (0.9 kb transcript) |
---|---|
Reference: | Raposo MP, et al. (2004) |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
AraR | Negative | -48:-20 | 2950159..2950187 | CTATTTTTTTGTCTGTACAAATTACAGCA |
Raposo MP, et al. (2004): RG PE SDM |
SigA | Promoter | -48:+7 | 2950133..2950187 | CTATTTTTTTGTCTGTACAAATTACAGCATAGTGACTACAATAAAGGGGATACCG |
Raposo MP, et al. (2004): RG PE |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
TGAATTAAAAAGCCGGGCTCTGCCCCCGGCTTTTTTTAAAAGAAA >>>>>> <<<<<< |
abnA |
|