Regulated Operon: abnA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
abnA
- 2949053..2950024
COG3507G  

Operon evidence: Northern blotting (0.9 kb transcript)
Reference: Raposo MP, et al. (2004)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
AraR Negative -48:-20 2950159..2950187 CTATTTTTTTGTCTGTACAAATTACAGCA Raposo MP, et al. (2004): RG PE SDM
SigA Promoter -48:+7 2950133..2950187 CTATTTTTTTGTCTGTACAAATTACAGCATAGTGACTACAATAAAGGGGATACCG Raposo MP, et al. (2004): RG PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
TGAATTAAAAAGCCGGGCTCTGCCCCCGGCTTTTTTTAAAAGAAA
           >>>>>>       <<<<<<
2949026..2949044
9..27
-12.0
 abnA

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai