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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | alsT |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| alsT | + | 1938925..1940322 | COG1115E | alsT-BAC-1 alsT-BAC-2 alsT-STA |
| Operon evidence: | Northern blotting (1.5 kb transcript) |
|---|---|
| Reference: | Yoshida K, et al. (2003) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| TnrA | Negative | ND | 1938864..1938880 | TGTTAAAAAATCTAACA |
Yoshida K, et al. (2003): AR HM GS |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| ACAAAGCTGCATTCAATAGTTGAATGCAGCTTTTTCATTATTGGA >>>>>>>>>>> <<<<<<<<<<< |
alsT |
|