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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | appDFABC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| appD | + | 1211477..1212463 | COG0444EP | appD-BAC-1 appD-BAC-2 appD-CLO | ||
| appF | + | 1212460..1213449 | COG4608E | |||
| appA | + | 1212845..1214476 | oligopeptide ABC transporter (oligopeptide-binding protein) | |||
| appB | + | 1215243..1216193 | COG0601EP | |||
| appC | + | 1216210..1217121 | COG1173EP |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Koide A & Hoch JA (1994) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| Hpr | Negative | ND | ND | ND |
Koide A, et al. (1999): DB OV |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGCAGGTCTCCTTTAGTCAGAAAATATACAAAGAGATCTGCTTTTTATGATTCTTA >>>>>>>>>>>>>>>> <<<<<<<<<<<<<< |
appC |
|