Regulated Operon: clpX

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
clpX
- 2884781..2886043
COG1219O clpX-BAC clpX-STA clpX-STR  

Operon evidence: Northern blotting (1.4 kb transcript)
Reference: Gerth U, et al. (1996), Serrano M, et al. (2001), Liu J, et al. (1999)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
CtsR Negative ND ND ND Kruger E, et al. (1998): DB
SigA Promoter -46:+4 2886119..2886168 AACACATTGTTACCGTCTTTTTGGAAAGTATGGTAAAATGCAATACATAC Gerth U, et al. (1998): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
ACAAACCTCCTGAGTGGTAACACTCAGGAGGTTTTTTTGCATGCAA
     >>>>>>>>>>>    <<<<<<<<<<<
2884742..2884767
14..39
-24.9
clpX

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai