 |
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | csbC |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| csbC | yxcC | + | 4088002..4089387 | COG2814G |
| Operon evidence: | Northern blotting (1.5 kb transcript) |
|---|---|
| Reference: | Akbar S, et al. (1999), Yoshida K, et al. (2000), BSORF |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigB | Promoter | ND | 4087895..4087949 | TTTTCAAAACAAATGTTTCAAATGAGATAGGAAATGGGTACTAATCTATTAACTT |
Akbar S, et al. (1999): RG; binding site mutation |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGGAATCGTCTCCTTATGAGACGATTCCTTTTTCTGTTTACAC >>>>>>>>>>> <<<<<<<<<<< |
csbC |
|