Regulated Operon: gerBABC

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
gerBA
+ 3688812..3690263

 
gerBB
+ 3690269..3691375

 
gerBC
+ 3691372..3692496

 

Operon evidence: transcriptional integrations; upstream and downstream genes are transcribed in the opposite direction
Reference: Corfe BM, et al. (1994), Presecan E, et al. (1997), Genbank Z92954
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigG Promoter -43:+11 3688733..3688786 TTTTCCTCGATAAGAATAATTCTCCTTTTTTGATACAAATTAATAAAAACCGTC Corfe BM, et al. (1994): PE
SpoVT Negative ND ND ND Bagyan I, et al. (1996): DB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
CAAAAGGGTGCGCATGATCGCGCACCCTTTTTTATGTTCCGA
     >>>>>>>>      <<<<<<<<
3692507..3692528
11..32
-19.0
gerBC

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai