Transcription factor: SigG

Factor type	ND
SWISS-PROT	ND
SubtiList	ND
Consensus seq.	GHATR(-35), GG-CATXHTA(-10)
Comment	RNA polymerase sporulation-specific sigma factor (Sigma G). Control of transcription in the forespore at late stages of sporulation. Null mutations prevent activation of Sigma K. Inactive in a spoIIIA mutant.
Link to	Phylogenetic profile, Weight matrix & Motif alignment

Operon	Regulated Gene	Absolute position	Location	Binding seq.(cis-element)	Experimental evidence
csbX-bofC	bofC	`2837442..2837488`	`-42:+5`	ATAAAACGGTTAAGCAGTAGCCTCTTTGGTCAAACTAATCATAAACG	Gomez M & Cutting SM (1997): PE RG
csgA-ybxH	csgA	`227992..228045`	None	ATTTTTCGCGTATGGATTTTCCCTATTTTAGCAAGCTATAGGGTAAAGATAGCA	Shchepetov M, et al. (1997): DB RG
dacF-spoIIAAB-sigF	dacF	`2446286..2446325`	`-37:+3`	GGCGTATAAAACCATCACGCTTGGAAAAAATAAAAAGGAT	Schuch R & Piggot PJ (1994): DB RG OV
exoA-ccpB	exoA	ND	ND	ND	Salas-Pacheco JM, et al. (2005): NB RG DB
gerAABC	gerAA	`3390714..3390754`	`-39:+2`	CACAGTATATCATTTTTTTAACAGGAAAAGATAACCTCTAC	Feavers IM, et al. (1990): RG PE
gerBABC	gerBA	`3688733..3688786`	`-43:+11`	TTTTCCTCGATAAGAATAATTCTCCTTTTTTGATACAAATTAATAAAAACCGTC	Corfe BM, et al. (1994): PE
gerD	gerD	`159081..159139`	`-39:+20`	GTTATGTATAATTCCAAACAGATGAATCATATTAAAGGTAAGACAAGTATGTGAAAGGA	Kemp EH, et al. (1991): RG DB OV PE RO
gerKACB	gerKA	`420047..420100`	`-42:+12`	TAATGCATAATCTCAATTTTAAAAGGAAGAATATGAGAAAACGACAAGGAAAGG	Igarashi T & Setlow P (2006): 5'-RACE-PCR, RT-PCR, DB OV DP
glcU-gdh	glcU	`444390..444436`	`-40:+7`	TTCCGGCGAATAATCACAACAATTCCAGCCAAAATAACAGCAAATAC	Rather PN & Moran CP Jr (1988): PE, promoter mutation
gpr	gpr	`2635633..2635674`	`-39:+3`	TTTAGCATGATTTATTCAGCAAATGGCAACAATATAGGTACT	Sussman MD & Setlow P (1991): RG PE DB OV, in-vitro transcription
rsfA	rsfA	ND	ND	ND	Juan Wu L, et al. (2000): RG DB OV
spoIIGA-sigE-sigG	sigG	`1605560..1605618`	`-40:+19`	GCAGTGCATATTTTTCCCACCCAAGGAGATACTTAACGTTGTACAGCAGCTCCTGTAGG	Sun DX, et al. (1991): PE RG
sleB-ypeB	sleB	`2400098..2400144`	`-41:+6`	AAAGAGTGTATAAAAATAACCTCGTTACAGAAAATACGATTACACTT	Moriyama R, et al. (1999): NB PE HB DB
splAB	splA	`1461397..1461440`	`-40:+4`	TTTTTTTCATAAGTAAGGGTATAGAAGGACACAATAACATGGCT	Pedraza-Reyes M, et al. (1994): RG DB OV PE RO Pedraza-Reyes M, et al. (1997): SDM RG
splAB	splB	`1461705..1461749`	`-41:+4`	TACAACTCATATCCTTTCCGCCTAGTGAGAAAAGTAACGTTAGTA	Pedraza-Reyes M, et al. (1994): RG DB OV PE Pedraza-Reyes M, et al. (1997): DB RG OV
spoIVB	spoIVB	`2520436..2520477`	`-39:+3`	CAGTTATAAATAAGCCGTCAGAAGGCAAAATTAAATGATGTA	Gomez M, et al. (1996): PE DB RG
spoVAABCDEF-lysA	spoVAA	`2443311..2443368`	`-37:+21`	GATGAATGAGAACAAAATCGAACCACATACTACATATATAACCACCGAAAGATGGTGA	Moldover B, et al. (1991): PE Sun DX, et al. (1989): DB RG
spoVT	spoVT	`63979..64018`	`-37:+3`	GGTGTATATTACATTTGATGTGACGGATACTAATTTCAAG	Bagyan I, et al. (1996): RG DB OV PE
sspA	sspA	`3025660..3025710`	`-39:+12`	TTCTGAATGAAGCCATGTGTTTTGACACATTCTATACTCACAAGGAGGTGA	Nicholson WL, et al. (1989): PE RO, nuclease protection
sspB	sspB	`1050344..1050390`	`-40:+7`	CTCCGCATGATTTTCCGGCCATTTTAACATAATACGTAGTAACAAGC	Fajardo-Cavazos P, et al. (1991): PE, promoter mutations, RG Nicholson WL, et al. (1989): PE RO
sspC	sspC	`2156160..2156205`	`-39:+7`	GCGTGTATAAATTAAAATAATCTCTCCATAATATGATTCAAACAAG	Nicholson WL, et al. (1989): nuclease protection, RO
sspD	sspD	`1414026..1414072`	`-39:+8`	GCCAGCATAAATAAACCCCGTATATTTCAAACTAAATACGCGTTAAG	Nicholson WL, et al. (1989): nuclease protection, RO
yfhQ-fabL-sspE	sspE	`937845..937894`	`-40:+10`	AGAGGAATAGCTATACGATCACCTGCACATTCTAATGACCGTGGAGGTGA	Fajardo-Cavazos P, et al. (1991): PE, promoter mutations, RG Nicholson WL, et al. (1989): PE, nuclease protection, RO Sun DX, et al. (1989): RO, nuclease protection, SDS-PAGE, RG, RNAP purification, in-vitro transcription
sspF	sspF	`53083..53133`	`-39:+12`	TTTAACGAAAGTTCCATCTGATTTAACAAAAGATAAAACAGTCACATATTA	Stephens MA, et al. (1984): S1 DP RG DB
acoR-sspH	sspH	`885573..885614`	`-40:+2`	TAAAGCATACTTCCTTCAGGAAATGGAAACGTTATGTATTGA	Cabrera-Hernandez A, et al. (1999): PE RG
sspI	sspI	`2931620..2931666`	`-43:+4`	AGAACAGCACATAATAAACCAGGTGCAGGGTTAGAATATACGTATTA	Cabrera-Hernandez A & Setlow P (2000): PE
sspI	sspI	`2931599..2931645`	`-43:+4`	ACATGATGTTATTATATCGCAAGAACAGCACATAATAAACCAGGTGC	Cabrera-Hernandez A & Setlow P (2000): PE
sspJ	sspJ	`3421632..3421674`	`-40:+3`	TATCCCGCATAATTTTTCAGGAAAAAGGCATCTTAAACATGTA	Bagyan I, et al. (1998): DB OV PE RG
sspK	sspK	`928312..928358`	`-41:+6`	TAACGCTTTATTACGTGGTGTTCTCCATATACTAACCTTACGTCTTC	Cabrera-Hernandez A & Setlow P (2000): PE
sspL	sspL	`2310807..2310854`	`-39:+9`	AAAAGAATTAAATCTTGATCATTGGTTCATCCTAATGGCGAGGTGAAC	Cabrera-Hernandez A, et al. (1999): PE RG DB OV
sspM	sspM	`2339615..2339661`	`-41:+6`	AAAAATTGTATGATCCTCCTCATTAATGCAAACGATACTTGTGAGGA	Cabrera-Hernandez A & Setlow P (2000): PE
sspN-tlp	sspN	`1930210..1930262`	`-40:+13`	GTATTCATGTTTACCCCTCCTTTTGAGAAACCTATCTGTTGAGGAGGGATAAA	Cabrera-Hernandez A, et al. (1999): PE DB OV RG
sspOP	sspO	`1926457..1926505`	`-41:+8`	GCTCTCTCATATAACACAATAAAAGAAGCCATATTATGATTGAGGTGAT	Cabrera-Hernandez A & Setlow P (2000): PE
ybaK-cwlD	ybaK	`156047..156093`	`-42:+5`	AATTCGGGCATTGTTTCATCATCCAAACCTCAAAATAATCGGTAAAA	Sekiguchi J, et al. (1995): PE NB DB
yckD	yckD	`369711..369775`	`-35:+30`	TTATGCATAAAAAATACAAGGCAGCAAAACATATGAAAAATAGGATTGGAGGAATAAAATGGATG	Wang S, et al. (2006): AR, Race-PCR
ydfR	ydfR	`600844..600912`	`-40:+29`	GACAGAATGAACCGACTGCCTTTCGGATATATTAAATTGCGATTGGCCGGAAGAAAAGCCAATCCCATG	Wang S, et al. (2006): AR, Race-PCR
ydfS	ydfS	`600919..600969`	`-37:+14`	CGAACAATATTTTTGGTATAGATGGATATATTAAGCCAAACAATGATAGCA	Wang S, et al. (2006): AR, Race-PCR
yfjS	yfjS	ND	ND	ND	Fukushima T, et al. (2002): RG NB
yfkED	yfkD	ND	ND	ND	Kuwana R, et al. (2002): SDS-PAGE, RG
yhcN	yhcN	`988958..989004`	`-40:+7`	TTTGCATGCATAATTAAAGCCAGTTAGAAAAACCTATAAGTAAAGTG	Bagyan I, et al. (1998): PE DB OV RG
yhcQ	yhcQ	`991263..991331`	`-39:+30`	TTCTGCATAATACACGGCAGACTGACACAAAATACAGCTGATCTGAAAAAAAAGGAGGAATTCGGTTTG	Wang S, et al. (2006): AR, Race-PCR
yhcV	yhcV	`997120..997177`	`-39:+19`	CCCTTTTTAAACGGCTCGTGTCTGAACATACTAATGATTGAAAGGGGTGCTGACAATG	Kuwana R, et al. (2002): SDS-PAGE, RG Wang S, et al. (2006): AR, Race-PCR
yisY	yisY	ND	ND	ND	Kuwana R, et al. (2002): SDS-PAGE, RG
yitGF	yitG	`1177251..1177313`	`-40:+23`	CGCTGAATAAACGAAGCCATCAGGGACATTCTAAGCAGAAGAAAAGGAGTGTGCTCTGAGATG	Wang S, et al. (2006): AR, Race-PCR
ykvUV	ykvV	`1450580..1450621`	`-33:+9`	AAGGATGATAAAGGAACAGCAGGGGCAAGCTAATTGAAAAGC	Imamura D, et al. (2004): NB PE RG, immunoblot analysis
ylaJ	ylaJ	ND	ND	ND	Kuwana R, et al. (2002): SDS-PAGE, RG
yndDEF	yndD	`1907313..1907358`	`-38:+8`	ACGAACATAAAAAATAGGTATACGGGAAAAATAATCCTATTAGAGA	Wang S, et al. (2006): AR, Race-PCR
yoaR	yoaR	`2042837..2042896`	`-40:+20`	AAATACATCAAAGGATAAGCGGCTGTTCATACTAATGATTGGGAGGTAAACCGACTTATG	Wang S, et al. (2006): AR, Race-PCR
yozQ	yozQ	`2028777..2028824`	`-38:+10`	AAGTGCATGAATACCTGCCCAACAGACAGAATAAGAAGAGTTGATATT	Wang S, et al. (2006): AR, Race-PCR
ypzA	ypzA	`2308444..2308497`	`-38:+16`	GGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTG	Wang S, et al. (2006): AR, Race-PCR
yqfSU	yqfS	`2594225..2594269`	`-40:+5`	AGCCTGGGTATAAAAAGAAAATGAGCTATGAGATGGAGAAAATCA	Urtiz-Estrada N, et al. (2003): PE NB RT-PCR
yraGF-adhB-yraED	yraG	`2752741..2752804`	`-39:+25`	TTCTGTATGCTTCAACTTCATTTCGGGAAATGTAACGTTGATAAAAGGAGGTTACATCAATATG	Wang S, et al. (2006): AR, Race-PCR
yrrD	yrrD	`2806181..2806234`	`-39:+15`	CATCGTATGAGTCTAAGGCGCAAAGCAAAACCTAAGCCTGTTCAACAAAAGGTG	Wang S, et al. (2006): AR, Race-PCR
yteA	yteA	`3153940..3154009`	`-38:+32`	TTATGAAAGTTCTCAGGCGATCTGTTCATACTAAAGGTATGCATCACAGAGAAACGAGGCGATCACATTG	Wang S, et al. (2006): AR, Race-PCR
yuzA	yuzA	`3224794..3224866`	`-38:+35`	GCATGTATAGATTCTCCAATATGTCACAATCTATAACTGTTTTAATAATTCATGGAGGAGGTTGCAAAACATG	Wang S, et al. (2006): AR, Race-PCR
yvaB	yvaB	`3446075..3446150`	`-38:+38`	GACAGAATAATCATTATGCATCTGTATGATAATAATTGATGTGTGATTTTTAAAAACGAAAGGGCTGGTAAAAATG	Wang S, et al. (2006): AR, Race-PCR
yvdP	yvdP	ND	ND	ND	Kuwana R, et al. (2002): SDS-PAGE, RG
yvdQ	yvdQ	`3542689..3542761`	`-39:+34`	GAAACATAAATGTTCCTCCGCTTGGGCACGTTATGAAATGTGCAATATTGAATATGGGAGGAGAATGAGCATG	Wang S, et al. (2006): AR, Race-PCR
sacB-yveBA	yveA	`3539098..3539142`	`-39:+6`	AGCGGTATTCTCTGTTACATATTGGGCATTGTAAGGAATATAAGG	Wang S, et al. (2006): AR, Race-PCR
ctpB	yvjB	`3623827..3623879`	`-39:+14`	GATTACATGAAATCTCCATCCTTTACATATACTATCTCTAGGTTTTGGTAAAG	Wang S, et al. (2006): AR, Race-PCR
ywhE	ywhE	`3849749..3849794`	`-42:+4`	TTCTGCGATGTTTAAAAACGATCTTTTTTTCTCATAATAGTAGAAA	Pedersen LB, et al. (2000): RG PE
yxeD	yxeD	`4066138..4066212`	`-39:+36`	GACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGATCATTCATG	Wang S, et al. (2006): AR, Race-PCR