Regulated Operon: gsiB

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
gsiB
+ 494506..494877
COG3729R  

Operon evidence: hybrid formation with RNA probes
Reference: Mueller JP, et al. (1992)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigB Promoter -38:+4 494441..494482 TGTTTGTTTAAAAGAATTGTGAGCGGGAATACAACAACCAAC Maul B, et al. (1995): HB PE DB
Mueller JP, et al. (1992): PE RG NB
Voelker U, et al. (1994): 2D PAGE, HB

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGCGATCCGGCACATCAGCTGGATCGCTTTTTTTTGGAATCT
     >>>>>>>>>>      <<<<<<<<<<
494915..494940
38..63
-20.7
gsiB

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai