Regulated Operon: katE-yxiS

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
katE katB - 4008143..4010203
COG0753P x0451-BAC katB-BAC x0451-BAC  
yxiS
- 4007803..4008093

 

Operon evidence: Northern blotting (2.5 kb transcript measured by Yoshida; 2.4 kb transcript measured by Engelmann)
Reference: Engelmann S, et al. (1995), Yoshida K, et al. (2000)
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigB Promoter -40:+4 4010232..4010275 TAGCAGTTTATATGAAGAACGCCACGGGTAAATGTGCTGTAGAA Engelmann S, et al. (1995): HB NB DB PE
unknown Promoter -50:+10 4010648..4010707 CTGTGCCTACGGCGATTTTTAACGGATCTCCTTTGACAAACGATAAGATTTTGGCAATGA Engelmann S, et al. (1995): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAAAAGAGACATCCTGTGTCTCTTTTTTTATTGGAAA
     >>>>>>>   <<<<<<<
4007781..4007797
6..22
-9.4
yxiS

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai