Regulated Operon: | kinA |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
kinA | scoB, | + | 1470026..1471846 | COG0642T |
Operon evidence: | linearized/supercoiled templates; downstream gene is transcribed in the opposite direction |
---|---|
Reference: | Predich M, et al. (1992), Perego M, et al. (1989) |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
SigH | Promoter | -42:+11 | 1469927..1469979 | TAAGAATAGAAGGAGAATACTCATTTTCTAGCGAATCATACTAGGTAAAAGTC |
Predich M, et al. (1992): PE, in vitro addition of E-SigH Antoniewski C, et al. (1990): RG |
Spo0A | Negative | +13:+33 | 1469981..1470001 | ATCTGTATATGTCGAAACACG |
Fujita M, et al. (1998): GS |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
AATAAAAACAACGGCTTAAACGCCGTTGTTTATCGTCTGCATT >>>>>>> <<<<<<< |
kinA |
|