Regulated Operon: lonA-ysxC

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
lonA lon - 2880466..2882790
COG0466O lonA-BAC lonA-BAC  
ysxC
- 2879882..2880469
COG0218R  

Operon evidence: Genome analysis
Reference: Riethdorf S, et al. (1994)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
CtsR Negative ND ND ND Kruger E, et al. (1998): DB
SigA Promoter -44:+17 2882872..2882932 TCTTTTCCTTTTTCATATCAGAAAGAAAGGGTATACTACGAGGAGACTGTTTTATAGAAAA Riethdorf S, et al. (1994): PE
SigA Promoter -47:+17 2882800..2882863 TGCCGTTTATTGTACAAGGATGAAAAAGTTGTATTATAATGGTTCATACTAAAGTCACGGAGGT Riethdorf S, et al. (1994): PE

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
ATAAACCGGTAGAGGATCCTCTACCGGTTTTATTTATCGTAT
     >>>>>>>>>    <<<<<<<<<
2879867..2879888
-6..15
-16.7
 ysxC

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai