Regulated Operon: med-comZ

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
med yjaW + 1206629..1207582
COG1744R  
comZ yjzA + 1207597..1207788

 

Operon evidence: Northern blotting (1.25 kb transcript)
Reference: Ogura M, et al. (1997)
Comments: Transcripts starting upstream of yjaU may end at the same terminator


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -40:+11 1206498..1206548 AGTGGAAAAGACAATTTTCATCAATTTTCGACAAATATTAAGAAAAACCTT Ogura M, et al. (1997): PE HM
SigA Promoter -46:+5 1206498..1206548 AGTGGAAAAGACAATTTTCATCAATTTTCGACAAATATTAAGAAAAACCTT Ogura M, et al. (1997): PE HM
Spo0A Negative ND ND ND Molle V, et al. (2003): GS CH

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
AAGAAGCCACTTTTTTGAAAGTGGCTTTTCACATGATTTT
     >>>>>>>>    <<<<<<<<
1207795..1207814
7..26
-11.7
comZ

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai