Regulated Operon: | med-comZ |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
med | yjaW | + | 1206629..1207582 | COG1744R | ||
comZ | yjzA | + | 1207597..1207788 |
Operon evidence: | Northern blotting (1.25 kb transcript) |
---|---|
Reference: | Ogura M, et al. (1997) |
Comments: | Transcripts starting upstream of yjaU may end at the same terminator |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
SigA | Promoter | -40:+11 | 1206498..1206548 | AGTGGAAAAGACAATTTTCATCAATTTTCGACAAATATTAAGAAAAACCTT |
Ogura M, et al. (1997): PE HM |
SigA | Promoter | -46:+5 | 1206498..1206548 | AGTGGAAAAGACAATTTTCATCAATTTTCGACAAATATTAAGAAAAACCTT |
Ogura M, et al. (1997): PE HM |
Spo0A | Negative | ND | ND | ND |
Molle V, et al. (2003): GS CH |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
AAGAAGCCACTTTTTTGAAAGTGGCTTTTCACATGATTTT >>>>>>>> <<<<<<<< |
comZ |
|