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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | mntABCD |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| mntA | ytgA | - | 3145038..3145958 | COG0803P | ||
| mntB | ytgB | - | 3144267..3145019 | COG1121P | ||
| mntC | ytgC | - | 3142954..3144261 | COG1108P | ||
| mntD | ytgD | - | 3142077..3142964 | COG1108P |
| Operon evidence: | Northern blotting (4.0 kb transcript) |
|---|---|
| Reference: | Que Q & Helmann JD (2000), Nickel M, et al. (2004) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| MntR | Positive at low Mn(II) concentration | ND | 3146070..3146089 | AATTTTGCATGAGGGAAACT |
Que Q & Helmann JD (2000): DB GS RG HM |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AGAAAGAGCTGGCTGATGCAGCTCTTTCTTTTAATTATA >>>>>>>> <<<<<<< |
mntD |
|