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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | motAB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| motA | mot | - | 1434433..1435245 | COG1291N | ||
| motB | mot | - | 1433676..1434461 | COG1360N | x0327-BAC |
| Operon evidence: | Northern blotting (1.6 kb transcript) |
|---|---|
| Reference: | Gilman MZ & Chamberlin MJ (1983), Mirel DB, et al. (1992) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigD | Promoter | -42:+5 | 1435275..1435321 | AATGTCCCTAAAGTTCCGGGCACCAAAACCGATATTAACCATAGACA |
Gilman MZ, et al. (1981): S1 RO, in-vitro transcription Gilman MZ & Chamberlin ML (1982): S1 |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAAGGAAGCCTTGTGACATATCAGGCTTCCTTTTTTTACTTATTA >>>>>>>>>>>> <<<<<<<<<<<< |
motB |
|