Regulated Operon: racA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
ywkC racA + 3798789..3799343
COG0789K ywkC-BAC  

Operon evidence: Genome analysis; downstream gene is on the opposite strand
Reference:
Comments:


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigH Promoter ND ND ND Ben-Yehuda S, et al. (2003): DB RG
Wu LJ & Errington J (2003): DB Western blot
Spo0A Positive ND ND ND Ben-Yehuda S, et al. (2003): DB RG
Wu LJ & Errington J (2003): DB Western blot
Molle V, et al. (2003): GS CH
Fujita M, et al. (2005): RG OV

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]
Downstream of
TTCAAATTTCAAACCTAAAGCAAAAAGCTCCCTTAAAGGGAGCTTTTTTTGTTACGCA
                          >>>>>>>   <<<<<<<
3799352..3799368
9..25
-13.2
ywkC

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai