Regulated Operon: rsfA

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
rsfA ipa-92r + 3861437..3862213
COG1792M  

Operon evidence: upstream and downsteam genes are in the opposite direction
Reference: Glaser P, et al. (1993)
Comments:

Promoters

Binding
factor		 Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
RsfA Negative ND ND ND Juan Wu L, et al. (2000): RG DB
SigF Promoter ND ND ND Juan Wu L, et al. (2000): RG DB OV
SigG Promoter ND ND ND Juan Wu L, et al. (2000): RG DB OV

Terminator

Terminator sequence Absolute position Position from stop codon Free energy
[kcal/mol]		 Downstream of
AAAAATCCCAAAACGGGCAGCTGTTTTGGGATTTTCGCCATGTGCA
     >>>>>>>>>>>    <<<<<<<<<<<
3862224..3862249
11..36
-17.9
 rsfA

Overview



Upper Region
Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai