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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | sdp |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| yvaW | sdpA | + | 3463320..3463796 | |||
| yvaX | sdpB | + | 3463793..3464764 | |||
| yvaY | sdpC | + | 3464807..3465418 |
| Operon evidence: | Genome analysis |
|---|---|
| Reference: | Gonzalez-Pastor JE, et al. (2003) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| AbrB | Negative | ND | ND | ND |
Fujita M, et al. (2005): RG DB |
| Rok | Negative | ND | ND | ND |
Albano M, et al. (2005): RG AR DB GS |
| Spo0A | Negative | ND | ND | ND |
Fujita M, et al. (2005): OV RG GS Molle V, et al. (2003): CH GS |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| TAATCCATTATAATTGAGTGTCTTGCGGATTGCTCCGCAAGACACTTTTTCAACGTGAAC >>>>>>>>>>>> <<<<<<<<<<<< |
yvaY |
|