Regulated Operon: | sigX-rsiX |
Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
---|---|---|---|---|---|---|
sigX | ypuM | - | 2414627..2415211 | COG1595K | ||
rsiX | ypuN | - | 2413585..2414691 |
Operon evidence: | Northern blotting (1.8 kb transcript) |
---|---|
Reference: | Azevedo V, et al. (1993), Horsburgh MJ, et al. (2001), Genbank L09228 |
Comments: |
Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
---|---|---|---|---|---|
SigA | Promoter | -40:+4 | 2415259..2415302 | TTCCCTTCCAAATTCCAGTTACTCGTAATATAGTTGTAATGTAA |
Huang X, et al. (1997): RO PE RG Huang X & Helmann JD (1998): PE |
SigX | Promoter | -37:+5 | 2415224..2415265 | AATGTAACTTTTCAAGCTATTCATACGACAAAAAAGTGAACG |
Huang X, et al. (1997): RO, in-vitro transcription, PE DB RG Huang X & Helmann JD (1998): SDM RG DB PE |
YvrH | Positive | ND | ND | ND |
Serizawa M, et al. (2005): NB DB AR RG |
Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
---|---|---|---|---|
AAAAAGAGCCCTTTAAGGCTCTTTTTTAGTTGCTAT >>>>> <<<<< |
rsiX |
|