Transcription factor: SigX

Factor type	ND
SWISS-PROT	ND
SubtiList	ND
Consensus seq.	TGTAACN(17)CGAC
Comment	ECF-type sigma factor
Link to	Phylogenetic profile, Weight matrix & Motif alignment

Operon	Regulated Gene	Absolute position	Location	Binding seq.(cis-element)	Experimental evidence
abh	abh	`1517766..1517807`	`-40:+2`	CGGGAAACTTTTTCAAAGTTTCATTCGTCTACGATATATTGA	Huang X & Helmann JD (1998): PE RG Huang X, et al. (1998): RO
csbB	csbB	`930702..930743`	`-36:+6`	ATTGTAACAAAAAACAGGTTTAAACGACTTTAAAAAAAGGAA	Huang X & Helmann JD (1998): PE RG DB
yabMNOPQ-divIC-yabR	divIC	`69018..69059`	`-36:+6`	TTTGAAACTTCTTCCTGTGAAAATGCGTCTAACTTTTAGACG	Huang X & Helmann JD (1998): PE RG DB Huang X, et al. (1998): RO Cao M, et al. (2002): AR
dltABCDE	dltA	`3952033..3952082`	`-38:+12`	AAAATGAAACTTTTTGAGCATCTGATCGTCAAATAATCATGTGATTGTCG	Cao M & Helmann JD (2004): ROMA RG PE
lytR	lytR	`3663161..3663202`	`-36:+6`	AATGAAACTTTTTTTTATAAAAAACGACTATTTTAGGATTTC	Huang X & Helmann JD (1998): DB RG PE Lazarevic V, et al. (1992): PE
pbpX	pbpX	`1765780..1765818`	None	TTTTTGACAACTTTTTTAGGGCTTTATTCGTCTAACAAA	Cao M & Helmann JD (2004): ROMA RG
pssA-ybfM-psd	pssA	`247672..247718`	`-39:+8`	TTCCTGTAACGCTATTCGATCACTATCGTCAAATAATATAGATGGTT	Cao M & Helmann JD (2004): ROMA RG
rapD	rapD	`3744267..3744308`	`-37:+5`	AATGTAACCAACTGTCAATGAGAGCCGTCAAAAGTTATGATA	Huang X & Helmann JD (1998): RG DB PE RO
sigX-rsiX	sigX	`2415224..2415265`	`-37:+5`	AATGTAACTTTTCAAGCTATTCATACGACAAAAAAGTGAACG	Huang X, et al. (1997): RO, in-vitro transcription, PE DB RG Huang X & Helmann JD (1998): SDM RG DB PE
yjbCD	yjbC	`1226822..1226865`	`-40:+4`	AAAAATGAAACCATGGCGGAAGTTCGCACGTCTTTATAGATGTA	Antelmann H, et al. (2000): PE NB Cao M, et al. (2002): HM RO RG DB Cao M, et al. (2002): AR
yqjL	yqjL	`2476904..2476941`	None	TTAGAGAAACGATCGGCTAAGGTTCTCCGTCTCCCTAG	Cao M, et al. (2002): ROMA Cao M, et al. (2002): AR
yrhH	yrhH	`2778501..2778545`	`-39:+6`	TCTATTGAAACATTTTTCAATACATTGCCGTCTAGTTGGTACCTT	Huang X & Helmann JD (1998): RO Huang X, et al. (1998): RO Cao M, et al. (2002): AR
ywbLMN	ywbN	`3928032..3928076`	`-39:+6`	AAATACAAAACAAATGATCAGTCCTATACGTCTTATGATAAATTA	Huang X & Helmann JD (1998): RO PE Huang X, et al. (1998): RO
ywnJ	ywnJ	`3759619..3759671`	`-44:+9`	TTTTTTTCTGTTACTTTTTGCTTTGTTTTACCGTCTATGTAGTTACATGTAGG	Cao M & Helmann JD (2004): ROMA RG PE Cao M, et al. (2002): AR
ywoA	ywoA	`3758484..3758527`	`-38:+6`	TTATTTGAAACTTTTCATGAGTAAGATTAGTCTACTAAATATAA	Cao M & Helmann JD (2002): ROMA AR DB RG PE HB Cao M, et al. (2002): AR Ohki R, et al. (2003): NB RG DB