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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | sipT |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| sipT | + | 1511308..1511889 | COG0681U | sipT-BAC |
| Operon evidence: | Northern blotting |
|---|---|
| Reference: | Tjalsma H, et al. (1998), Genbank AF012285 |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| DegU | Positive | ND | 1511245..1511266 | TTTTTTATGATAAAGTAAAAGA |
Tjalsma H, et al. (1998): OV RG NB |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| AAAAACGCCTTGCTGGCCTAGGACAGCAGGCGTTTTTATTTTGAAAA >>>>>>>>>> <<<<<<<<< |
sipT |
|