Regulated Operon: spo0F

Genes
Genes Synonyms Direction Genome position Function COG ID Conserved groups
spo0F
- 3809550..3809924
COG2204T spo0F-BAC  

Operon evidence: lacZ transcriptional fusions
Reference: Trach K, et al. (1988)
Comments: The stem-loop proposed by Trach et al. lacks a T-stretch.


Promoters

Binding
factor
Regulation Location Absolute position Binding seq.(cis-element) Experimental evidence
SigA Promoter -44:+20 3809979..3810042 GAAAATGCTCAGAAAATGTCGTAAAGTAGACTATTATAATTAAAGGAAATAGGAAAATCAAACA Trach K, et al. (1988): S1
Lewandoski M, et al. (1986): S1
SigH Promoter -43:+9 3809958..3810009 TTATAATTAAAGGAAATAGGAAAATCAAACAGAATACATACAATACTGCTTA Predich M, et al. (1992): PE, in-vitro transcription, dinucleotide priming
Lewandoski M, et al. (1986): S1
Spo0A Positive -84:-51 3810012..3810049 CAAAAGAGAAAATGCTCAGAAAATGTCGTAAAGTAGAC Strauch MA, et al. (1993): DP SDM FT
Spo0A Positive +11:+53 3809913..3809955 TTTGACGAAAATCATAATATTGGGGTGTAAAATGATGAATGAA Strauch MA, et al. (1993): DP SDM FT

Terminator

No Data

Overview



Upper Region






Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai