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Copyright: Human Genome Center, Inst. Med. Sci., Univ. Tokyo; 1999-2008
Contact: Kenta Nakai |
| Regulated Operon: | spoVB |
| Genes | Synonyms | Direction | Genome position | Function | COG ID | Conserved groups |
|---|---|---|---|---|---|---|
| spoVB | spoIIIF | + | 2829564..2831120 | COG2244R |
| Operon evidence: | upstream and downstream genes are in opposite directions |
|---|---|
| Reference: | Popham DL & Stragier P (1991) |
| Comments: |
| Binding factor |
Regulation | Location | Absolute position | Binding seq.(cis-element) | Experimental evidence |
|---|---|---|---|---|---|
| SigE | Promoter | ND | 2829486..2829528 | CTTGTCATGCTTGGACGACATATACGCATATCTTTATTGTATA |
Popham DL & Stragier P (1991): RG |
| SpoIIID | Negative | ND | ND | ND |
Eichenberger P, et al. (2004): GS AR |
| Terminator sequence | Absolute position | Position from stop codon | Free energy [kcal/mol] |
Downstream of |
|---|---|---|---|---|
| CGATAATGGTCACGTGCGGTGCCCATCTTTTTCATCAATATA >>>>>>>> <<<<<<<< |
spoVB |
|